Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCTGACGGGTGGACAAGGGGGGGTTAGCAGCTGGGCTGCGAC
((((((((.(((((((.....&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001377525
GeneSymbolUGP2
Binding site74,120
Score0.923
Seed1
Au0.353
Energy-21.1
Binding len17
Me-4.994
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure