Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCTCGTCCGCCGGGAGCTGCGGCTGCC
..((((((((((((.(..(((&.))).).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001377538
GeneSymbolSLMAP
Binding site165,196
Score0.846
Seed1
Au0.235
Energy-25.6
Binding len20
Me-5.692
Phylopstem0.6727635750000002
Phylopflank0.24797069499999996
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure