Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCCCTGGTTGCAGTAACAGCCATCGTGCTGTACGTGCCAGGTC
(((((((((.....((((((..&.))).))).....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001377552
GeneSymbolSLMAP
Binding site3587,3632
Score0.846
Seed1
Au0.426
Energy-18.2
Binding len23
Me-13.498
Phylopstem3.8822099999999997
Phylopflank3.396590625000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure