Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCTGGGGAGACTTGAGCAGATGTTTCATTTTGGCCTGGCCAGTGG
((((((((.(((((((((((..&)))))))))))...........................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330568
GeneSymbolUSB1
Binding site1795,1842
Score0.923
Seed1
Au0.471
Energy-23.6
Binding len47
Me-4.994
Phylopstem1.1741264545454546
Phylopflank0.44099394374999995
Longest consecutive pairings11
Position of longest consecutive pairings36
Pairings in 3prime end6
Position3UTR
2D Structure