Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCAGATGGAGCCAT
...(((((((..(((((.....&))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001351538
GeneSymbolSLC38A11
Binding site5254,5268
Score1.0
Seed0
Au0.515
Energy-21.8
Binding len14
Me-12.686
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure