Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAAAATGCCCGGCTGCAGCTGCAGC
(((((((((((((((...(((&.)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378030
GeneSymbolCCDC78
Binding site754,782
Score0.962
Seed1
Au0.456
Energy-27.4
Binding len20
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure