Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCACCGCAGCAGCC
..((.((((((((.((..(((&))))).)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378090
GeneSymbolWASHC1
Binding site1493,1511
Score0.923
Seed0
Au0.338
Energy-21.4
Binding len18
Me-9.933
Phylopstem1.854694625
Phylopflank2.23504885875
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure