Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAACAACCAGCAGCTA
....((((((((((((.((((&))))..)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378107
GeneSymbolR3HDM1
Binding site1985,2005
Score0.923
Seed0
Au0.471
Energy-22.0
Binding len20
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure