Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCAGCTCGCTGGCCATCCCGCGGCTGCGC
.(((((((((((.((...(((&.)))...))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378122
GeneSymbolSH3D19
Binding site207,239
Score0.846
Seed1
Au0.162
Energy-23.7
Binding len23
Me-5.316
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure