Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCAGCCGTAGGAGA
...(..((((((((((..(((&)))..))))))))))..).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378126
GeneSymbolSH3D19
Binding site792,811
Score1.0
Seed0
Au0.397
Energy-20.2
Binding len19
Me-12.535
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end6
Position5UTR
2D Structure