Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCAGCAGTGGCAGT
((((.(((((((((((.....&)))))).))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378157
GeneSymbolXRRA1
Binding site3647,3665
Score0.846
Seed0
Au0.456
Energy-20.8
Binding len18
Me-8.057
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end3
Position3UTR
2D Structure