Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCGGCATAAGCAGGCGCAGCTGCAGG
(((((((((((.((((.....&.)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378188
GeneSymbolCCDC187
Binding site2710,2740
Score0.923
Seed1
Au0.368
Energy-27.0
Binding len18
Me-7.284
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure