Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCTAGGAAGACTGAGAGTGAACTGGAGAAATCATTTGCAGAGAAAGTGA
((((..(((((((((((((.((&))))))))))))..............................)))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001351576
GeneSymbolCCDC196
Binding site579,631
Score1.0
Seed0
Au0.574
Energy-18.8
Binding len52
Me-9.958
Phylopstem0.9355253488372092
Phylopflank1.4566663699999998
Longest consecutive pairings12
Position of longest consecutive pairings40
Pairings in 3prime end7
PositionCDS
2D Structure