Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCACTCATAGGCAATGCTGCAAT
((((((((((((.((((((((&)))))))))).....)))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378199
GeneSymbolROBO2
Binding site7472,7500
Score0.923
Seed1
Au0.588
Energy-19.2
Binding len28
Me-5.227
Phylopstem1.1893602315789473
Phylopflank0.58412381125
Longest consecutive pairings10
Position of longest consecutive pairings18
Pairings in 3prime end8
Position3UTR
2D Structure