Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGACTACGGCTGCAGCAGCAAT
((((.((((((((((((.(((&)))....)))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378207
GeneSymbolMTCL1
Binding site3579,3604
Score0.846
Seed0
Au0.338
Energy-24.7
Binding len25
Me-8.057
Phylopstem2.104257
Phylopflank2.1387772687499997
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure