Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGACATACTTCAGCTGCT
..(((((((.((((((..((.&))..))).))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378211
GeneSymbolSHOC1
Binding site2900,2920
Score0.862
Seed1
Au0.618
Energy-19.7
Binding len20
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure