Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCAGTGGCAGCCACCGTGGCAGCCGCGGATGCGAC
(((((.((((((((((..(((&.)))...)))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378262
GeneSymbolSMARCA1
Binding site135,173
Score0.923
Seed0
Au0.324
Energy-26.8
Binding len24
Me-5.839
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure