Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCGCAGCGACGCGGCTGGCAAG
((((((((((((((((..((.&)).)))))..)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378290
GeneSymbolRNF13
Binding site85,108
Score0.846
Seed1
Au0.353
Energy-21.5
Binding len23
Me-3.938
Phylopstem3.196704789473684
Phylopflank2.8557641449999998
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end5
Position5UTR
2D Structure