Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGGCAGCCGCCGCTGCC
..(((((.((((((((..(((&)))..)))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378404
GeneSymbolNFIX
Binding site2580,2600
Score0.923
Seed0
Au0.279
Energy-26.7
Binding len20
Me-7.271
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure