Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACAGCCTGGCTGG
...((((((.(((((((((..&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351589
GeneSymbolC13orf42
Binding site1277,1293
Score1.0
Seed0
Au0.441
Energy-21.3
Binding len16
Me-7.757
Phylopstem-0.35820725555555555
Phylopflank0.3087157499999999
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure