Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGGATTTTGGAGCCTGTGGCTGCAAG
((((((((((((((.((((((&.)))))).)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378414
GeneSymbolHDAC4
Binding site5684,5714
Score0.846
Seed1
Au0.397
Energy-24.5
Binding len24
Me-4.673
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure