Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTCAACCGCACCGCC
..((.(.((((((((...(((&)))..))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378423
GeneSymbolSPDYE1
Binding site546,564
Score0.846
Seed0
Au0.382
Energy-18.5
Binding len18
Me-10.853
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure