Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGACAACTGGCACACCAGCTGTAAC
((((((((((((((((..(((&)))..)))))))......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378454
GeneSymbolALMS1
Binding site3850,3878
Score0.923
Seed1
Au0.544
Energy-22.6
Binding len28
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure