Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGCTGCTCCGCAGTGCAC
.((((.((((((..(((((((&)))))).)....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378532
GeneSymbolATP6V0A1
Binding site3475,3498
Score1.0
Seed0
Au0.382
Energy-21.4
Binding len23
Me-7.84
Phylopstem0.0567690125
Phylopflank0.014506140000000028
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure