Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGCTCATGCGCAGCTGTC
..(((((((((...((.((((&)))).)).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378536
GeneSymbolATP6V0A1
Binding site2258,2280
Score0.846
Seed1
Au0.368
Energy-22.1
Binding len22
Me-10.45
Phylopstem5.885619999999999
Phylopflank5.411588675
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure