Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGCTGCTCCGCAGTGCAC
.((((.((((((..(((((((&)))))).)....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378536
GeneSymbolATP6V0A1
Binding site3241,3264
Score1.0
Seed0
Au0.382
Energy-21.4
Binding len23
Me-7.84
Phylopstem-0.721261
Phylopflank0.051967105
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure