Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGCTGCTCCGCAGTGCAC
.((((.((((((..(((((((&)))))).)....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378538
GeneSymbolATP6V0A1
Binding site3220,3243
Score0.923
Seed0
Au0.382
Energy-21.4
Binding len23
Me-7.84
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure