Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCTTCCAAGGATCTGAAGAGGAAGCTGCGGCTGTGAC
((((((((((((((.......&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351596
GeneSymbolCCDC197
Binding site285,326
Score1.0
Seed1
Au0.456
Energy-21.1
Binding len16
Me-4.906
Phylopstem-0.10819950000000002
Phylopflank-0.46528541999999995
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure