Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTGCAACCGGCCGTCGGGCCTCGAGCCGCAGCCGGGGGTCTTCGACTGCCTGCGAG
((((((((((((((...((((&.))))..)))))))))..................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378594
GeneSymbolZAP70
Binding site433,492
Score0.846
Seed1
Au0.294
Energy-22.7
Binding len40
Me-4.906
Phylopstem3.886327125
Phylopflank3.3240749924999995
Longest consecutive pairings9
Position of longest consecutive pairings24
Pairings in 3prime end5
PositionCDS
2D Structure