Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGCGCTCAGACAAAGCAGCTGCAGCTGA
...(((((((((((((...((&.))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378617
GeneSymbolCC2D2A
Binding site4447,4478
Score0.923
Seed0
Au0.574
Energy-23.8
Binding len20
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure