Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGGGGCTGGGCTGCAT
.(((((((.(((((.(((...&))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001378743
GeneSymbolCYLD
Binding site5653,5670
Score0.846
Seed1
Au0.441
Energy-18.5
Binding len17
Me-5.585
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure