Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAACTACCCAGTTT
....(((((.(((((((((((&)))))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351601
GeneSymbolINTS6L
Binding site1490,1510
Score0.923
Seed0
Au0.647
Energy-19.4
Binding len20
Me-10.789
Phylopstem6.84772418181818
Phylopflank5.2549483725
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure