Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCGCAGTTGACAGT
(((((((((((((((......&)))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001379141
GeneSymbolSETBP1
Binding site4585,4602
Score1.0
Seed1
Au0.485
Energy-22.6
Binding len17
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end2
PositionCDS
2D Structure