Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACTGACAGCTGCT
..((((((((((.(((.....&)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351622
GeneSymbolC3orf85
Binding site1400,1415
Score0.846
Seed1
Au0.529
Energy-18.3
Binding len15
Me-6.246
Phylopstem-0.20497712727272727
Phylopflank-0.12888610249999993
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure