Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCTGTGGCTGCT
..((((((((((((...((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001379198
GeneSymbolKANSL1
Binding site4219,4236
Score1.0
Seed1
Au0.456
Energy-21.8
Binding len17
Me-5.925
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure