Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATGTACCTCTGGTGTGTCAGGG
.((((((((((...(((.((..&)).))).....)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330570
GeneSymbolB4GALT6
Binding site2004,2026
Score0.846
Seed1
Au0.603
Energy-17.9
Binding len22
Me-9.286
Phylopstem-0.1858193386
Phylopflank-0.011581530375000017
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure