Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCGCACCGCAGCCTGTC
..((((((((((.(((.((((&)))).)))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001379226
GeneSymbolSHANK2
Binding site571,591
Score0.923
Seed1
Au0.294
Energy-23.7
Binding len20
Me-6.246
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure