Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAGGGGCCGGGCTGCAC
.(((((((.(((((.(..(((&)))..).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001379226
GeneSymbolSHANK2
Binding site305,325
Score0.923
Seed1
Au0.324
Energy-22.7
Binding len20
Me-5.585
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure