Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTAGATAGGGAGCGGGAATTGCACGCACAGCTGCAGA
(((((((((.(..(((((...&.)))))..).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001379277
GeneSymbolAKAP9
Binding site5178,5218
Score0.923
Seed1
Au0.412
Energy-21.0
Binding len20
Me-9.816
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure