Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTCAGCGCCAGCTGGAAG
((.((((((..((((.(((((&)))))))))..)))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001379277
GeneSymbolAKAP9
Binding site5476,5497
Score0.846
Seed0
Au0.574
Energy-19.9
Binding len21
Me-9.795
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure