Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCACCTCCGCAGCAGCAAC
((((.(((((((..((.((((&))))..))..))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001379291
GeneSymbolBRD4
Binding site2581,2604
Score1.0
Seed0
Au0.221
Energy-23.8
Binding len23
Me-10.203
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure