Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCTACGTGTCGGAGCAGGACGGATCCGTCCTGAGCGTGCCGGGA
.((((((((((.(((((((((.&)))))))))))..........................)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001379500
GeneSymbolCOL18A1
Binding site2201,2247
Score0.846
Seed1
Au0.294
Energy-19.9
Binding len46
Me-7.14
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings35
Pairings in 3prime end7
PositionCDS
2D Structure