Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCTGGGGTTGGGGCTC
....((((((.(((((((((((&)))))))))))..)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001351625
GeneSymbolMAPK10
Binding site4966,4986
Score1.0
Seed0
Au0.529
Energy-22.8
Binding len20
Me-12.371
Phylopstem-0.6048341363636364
Phylopflank0.26947957437500003
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure