Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGGAGATGTACGACCGCGCTGCAGA
(((((((.(((((((((....&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001379636
GeneSymbolKIF1A
Binding site2593,2620
Score1.0
Seed1
Au0.382
Energy-26.3
Binding len18
Me-6.251
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure