Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTTCCAGCCGCGGCCGACCATAGAGATGCGGC
(((((((((((((((...(((&)))....))))))))))............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001379659
GeneSymbolZNF142
Binding site197,232
Score0.846
Seed1
Au0.265
Energy-22.5
Binding len35
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings18
Pairings in 3prime end5
Position5UTR
2D Structure