Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGATCATCCGGAGCTGCGAG
((((((((.(((.((...(((&))).....)).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001381860
GeneSymbolXCR1
Binding site1069,1093
Score0.897
Seed1
Au0.412
Energy-22.5
Binding len24
Me-6.516
Phylopstem3.052561375
Phylopflank2.00430699
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure