Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGGAAAGTGGAGCTGCAAG
((((((((.((.((...(((.&)))....)).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001381866
GeneSymbolRCC1
Binding site632,654
Score0.846
Seed1
Au0.412
Energy-20.6
Binding len22
Me-9.309
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure