Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGTGCAGCCTTTGGGGGCCACCTGGCAGCTGTGGA
(((((((((((((((((.(((&))).)))))))...............)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001381874
GeneSymbolIQANK1
Binding site773,810
Score0.923
Seed1
Au0.324
Energy-24.5
Binding len37
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure