Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCAGCCTCATAGGGTGGGATACAGCAGCTTTTTTTGCAGT
((((((((((((((((((((.&)))))))))).................))))))......)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001382
GeneSymbolDPAGT1
Binding site1675,1719
Score0.846
Seed1
Au0.529
Energy-21.0
Binding len44
Me-3.938
Phylopstem2.8594247093023255
Phylopflank1.9309723874999996
Longest consecutive pairings10
Position of longest consecutive pairings34
Pairings in 3prime end7
Position3UTR
2D Structure