Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCTGCTGCTGCAGA
(((((((.(((((....(((.&)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001382
GeneSymbolDPAGT1
Binding site1343,1360
Score0.846
Seed1
Au0.471
Energy-20.3
Binding len17
Me-8.077
Phylopstem5.976101985714285
Phylopflank5.936950952499998
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end3
PositionCDS
2D Structure